XU LANDÉN LABORATORY · KAROLINSKA INSTITUTET

Explore the irradiated skin atlas

Compare single-cell RNA expression with continuous genome-wide epigenome tracks from the same study.

Cell identity meets gene expression

Matched coordinates. Matched cells. A shared view of the atlas.

Colour cells by

Saved integrated UMAP Original annotations · fixed geometry · no reclustering

Original identities & major-class boundaries

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RNA expression · log1p normalized

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Colour bars identify major classes; counts reflect the current selection.

nonRT and RT share the same coordinates and expression colour scale

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Compare the expression distribution within the current cell selection.

Group cells by

Split by

Plot type

Show individual cells

Cell-level visual comparison; no significance test is applied

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Enter up to 50 genes, separated by commas, semicolons or new lines.

Gene list

Group cells by

Split by

Display

Colour values

Cluster genes

Cluster groups

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Clustering changes the order of this summary only. Z-scores are computed per gene across the displayed groups.